fSTG Toolkit documentation

fSTG Toolkit is an open-source Python library and CLI for Spatio-Temporal Graph Analysis of fMRI data. It models brain connectivity data as spatio-temporal graphs and provides tools for building, analysing, and interactively visualising them via a Dash web dashboard.

Getting Started

• Installation
  • Requirements
  • Install from PyPI
  • Install from Source
  • Verify the Installation
  • Optional Dependencies
• Usage
  • Input File Formats
  • Building Graphs
  • Calculating Metrics
  • Frequent Pattern Mining
  • Visualising Results
  • Plotting
  • Factor and Subject Detection

Advanced

• Tutorials
  • Building Spatio-Temporal Graphs
  • Computing Graph Metrics
  • Running the Dashboard
  • Frequent Subgraph Pattern Mining
• Concepts
  • Spatio-Temporal Graphs
  • RC5 Interval Algebra
  • Data Model

Reference

• CLI Reference
• API Reference
• Changelog

Indices and tables

• Index

• Module Index

• Search Page